DENM

DENM (Dissipative Electroelastic Network Model) is a software package designed to add dissipation to elastic network models (ENM) through electrostatic interactions of partial charges and can be used to describe both dynamic and static properties of proteins. The model combines the harmonic network of beads (ENM) with overdamped dynamics of the normal modes (Langevin dynamics).

Reference to published work:

This work was supported by the National Science Foundation (Molecular and Cellular Biosciences Division, Grant No. MCB-1157788 and by Chemical Theory, Models, and Computational Methods, CHE-1464810).

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© 2015 Arizona Board of Regents acting for and on behalf of Arizona State University ("ABOR"). All rights reserved. This software is protected by the copyright laws of the United States and international treaties, may not be copied, reproduced, distributed, sold or offered for sale without the express written permission of the copyright owner, and is only for academic, non-commercial use. No modifications or derivations of this software are permitted under any circumstances, and this software may not be incorporated into any other software or other work. ABOR shall not be liable for any actions taken in reliance on use of this software.