Presentations and PDFs
Presentations:
- "Tug-of-war of subatomic particles: Electron pushing the proton", Johns Hopkins Chemistry, April, 2022 .
- "Diffusion in Water", CBP at ASU, January, 2021 seminar recording.
- "Many faces of the protein-water interface: From wetting of active site to protein mobility", Telluride, June, 2019.
- "Is biology thermodynamic? Fluctuations, aging, and efficiency of enzymes", ITMO, St Petersburg, 2019.
- "Dynamics, aging, and efficiency of enzymes", Telluride, 2018.
- "Temperature and solvent (solute) polarizability in electron transfer reactions", DOE, Solar Photochemistry, June, 2017.
- "Depolarized light scattering and terahertz absorption of protein solutions", ACS - San Fransisco, CA, April, 2017.
- "Feeding biology with electrons", video recording
- "Is Thermodynamics OK for Bioenergetics?", ASU/UA "BioPhest" 2015 meeting.
- "Discovery of Water Structural Transitions near Interfaces of Polarizable Solutes", APS-Meeting, March 2015.
- "Photosynthetic and Protein Electron Transfer: Is Biology (Thermo)dynamic?", U. Calgary, Dec. 2014.
- "Structure and Dynamics of Hydration Shells (of Proteins)", Telluride, June 2014.
- "What can biology teach us about the condensed phase?", U. South Florida, Nov. 2014
- "Toward an Accurate Model for the Line Shape Analysis of 2D Correlation Spectra" APS-Meeting, March 2014.
PDFs of papers:
- "Dynamical effects in protein electrochemistry", J. Phys. Chem. B (2019) or (AM).
- "Optical absorption by charge-transfer molecules", J. Phys. Chem. B (2019) or (AM).
- "Screening of Coulomb interactions in liquid dielectrics", J. Phys.: Condens. Matter (2019) or (AM).
- "Nonequilibrium vibrational population and donor-acceptor vibrations affecting rates of radiationless transitions", J. Chem. Phys. (2019) or (AM).
- "Terahertz absorption of lysozyme in solution", J. Chem. Phys. 147, 084502 (2017) or (AM).
- "Electron-transfer chain in respiratory complex I", Sci. Rep. 7, Article number: 5495 (2017) or (preprint).
- "Solvent-Induced Shift of Spectral Lines in Polar-Polarizable Solvents", J. Phys. Chem. A, 2017, 121 (11), 2232–2240 or (preprint).
- "Theory and Electrochemistry of Cytochrome c", J. Phys. Chem. B, 2017, 121 (19), 4958–4967 or (preprint).
- "Impact of Temperature and Non-Gaussian Statistics on Electron Transfer in Donor-Bridge-Acceptor Molecules", J. Phys. Chem. B, 2017, 121 (12), 2665–2676 or (preprint).
- "Free energy functionals for polarization fluctuations: Pekar factor revisited", J. Chem. Phys. 146, 064504 (2017) or (preprint).
- "Dielectric constant of water in the interface", J. Chem. Phys. 145, 014504 (2016) or (preprint).
- "Dynamical and orientational structural crossovers in low-temperature glycerol", Phys. Rev. E 94, 012616 (2016) or (preprint).
- "Configurational entropy of polar glass formers and the effect of electric field on glass transition", J. Chem. Phys. 145 (2016) or (preprint).
- "Mobility of nanometer-size solutes in water driven by electric field", Physica A, Volume 463, 1 December 2016, Pages 366–375 or (preprint).
- "Polarizability of the active site of cytochrome c reduces the activation barrier for electron transfer", Scientific Reports 6, Article number: 28152 (2016) or (preprint).
- "Marcus Bell-Shaped Electron Transfer Kinetics Observed in an Arrhenius Plot", J. Am. Chem. Soc., 2016, 138 (29), pp 9251–9257 or (preprint).
- "Response to ``Comment on Nonlinear dielectric response of polar liquids'', J. Chem. Phys. 144, 087102 (2016) or (preprint)
- "Communication: Temperature derivative of the dielectric constant gives access to multipoint correlations in polar liquids", D. V. Matyushov and R. Richert, J. Chem. Phys. 144, 041102 (2016) or (preprint)
- "Protein electron transfer: is biology (thermo)dynamic?", D. V. Matyushov, "Topical review" J. Phys.: Condens. Matter or (preprint)
- "Electrophoresis without charge: Mobility of nanometer-size solutes in water", arXiv:1507.07952.
- "Free energy of ion hydration: Interface susceptibility and scaling with the ion size", JCP 143, 044511 (2015) or (preprint)
- "Kubo’s Line Shape Function for a Linear-Quadratic Chromophore−Solvent Coupling", J. Phys. Chem. B 2015, 119, 9006−9008 or (preprint)
- "Photosynthetic diode: electron transport rectification by wetting the quinone cofactor", PCCP 17, 22523 (2015) or (preprint)
- "Nonlinear dielectric response of polar liquids", JCP 142, 244502 (2015) or (preprint)
- "Interfacial Structural Transition in Hydration Shells of a Polarizable Solute", PRL 114, 207801 (2015) or (preprint)
Dissertations and Theses:
- "Temperature and polarizability effects on electron transfer in biology and artificial photosynthesis", Morteza Waskasi, 2019.
- "FDT violation in proteins", Salman Seyedi, 2018.
- "Solvent Electrostatic Response: From Simple Solutes to Proteins", Mohammadhasan Dinpajooh, 2016.
- "Electrostatic Properties of Water at Interfaces with Nanoscale Solutes", Allan Friesen, 2012.
- "Electric Fields and Solvation in Microscopic Liquids", Daniel Martin, 2008.
- "A Computational Study in the Thermodynamic and Dynamic Properties of Electron Transfer Proteins", David LeBard, 2008.